## Publications

Nonequilibrium probability currents in optically-driven colloidal suspensions

S. Thapa, D. Zaretzky, R. Vatash, G. Gradziuk, C. Broedersz, Y. Shokef, and Y. Roichman

arXiv:2310.12718 (2023)

Emergent disorder and mechanical memory in periodic metamaterials

C. Sirote-Katz, D. Shohat, C. Merrigan, Y. Lahini, C. Nisoli, and Y. Shokef

arXiv:2202.04000 (2022)

Bloch oscillations, Landau–Zener transition, and topological phase evolution in an array of coupled pendula

I. Neder, C. Sirote, M. Geva, Y. Lahini, R. Ilan, and Y. Shokef**Proceedings of the National Academy of Sciences of the USA** 121, e2310715121 (2024)

Many-body interactions between contracting living cells

R. Golkov and Y. Shokef

**European Physical Journal E ** 47, 14 (2024)

Emergent clustering due to quorum sensing interactions in active matter

S. Thapa, B-E. Pinchasik, and Y. Shokef

**New Journal of Physics** 26, 023010 (2024)

Percolation in networks of liquid diodes

C. Sammartino, Y. Shokef, and B-E. Pinchasik**Journal of Physical Chemistry Letters ** 14, 7697 (2023)

How to control frustration in materials

Y. Shokef**Frontiers for Young Minds ** 10, 773189 (2022)

Introduction to force transmission by nonlinear biomaterials

X. Mao and Y. Shokef** Soft Matter ** 17, 10172 (2021)

Mean-field interactions between living cells in linear and nonlinear elastic matrices

C. Sirote and Y. Shokef** Physical Review E ** 104, 024411 (2021)

Putting a spin on metamaterials: Mechanical incompatibility as magnetic frustration

B. Pisanty, E. C. Oğuz, C. Nisoli, and Y. Shokef

**SciPost Physics** 10, 136 (2021)

Topologically protected steady cycles in an ice-like mechanical metamaterial

C. Merrigan, C. Nisoli, and Y. Shokef** Physical Review Research** 3, 023174 (2021)

Real-time steering of curved sound beams in a feedback-based topological acoustic metamaterial

L. Sirota, D. Sabsovich, Y. Lahini, R. Ilan, and Y. Shokef

**Mechanical Systems and Signal Processing** 153, 107479 (2021)

Constraint relaxation leads to jamming

E. Teomy and Y. Shokef** Physical Review E** 102, 062155 (2020)

Feedback-based Topological Mechanical Metamaterials

L. Sirota, Y. Lahini, R. Ilan, and Y. Shokef**Fourteenth International Congress on Artificial Materials for Novel Wave Phenomena (Metamaterials)**, pp. 415-417 (2020)

Non-Newtonian topological mechanical metamaterials using feedback control

L. Sirota, R. Ilan, Y. Shokef, and Y. Lahini** Physical Review Letters** 125, 256802 (2020)

Target finding in fibrous biological environments

D. Gomez, E. Teomy, A. Lesman, and Y. Shokef

**New Journal of Physics** 22, 103008 (2020)

Topology restricts quasidegeneracy in sheared square colloidal ice

E. C. Oğuz, A. Ortiz-Ambriz, H. Shem-Tov, E. Babià-Soler, P. Tierno, and Y. Shokef

**Physical Review Letters** 124, 238003 (2020)

Arrested states in persistent active matter: gelation without attraction

C. Merrigan, K. Ramola, R. Chatterjee, N. Segall, Y. Shokef, and B. Chakraborty

**Physical Review Research** 2, 013260 (2020)

Response evolution of mechanical metamaterials under architectural transformations

A. S. Meeussen, E. C. Oğuz, M. van Hecke, and Y. Shokef** New Journal of Physics** 22, 023030 (2020)

Topological defects produce exotic mechanics in complex metamaterials

A. S. Meeussen, E. C. Oğuz, Y. Shokef, and M. van Hecke

**Nature Physics** 16, 307 (2020)

Multiple peaks in the displacement distribution of active random walkers

E. Teomy, Y. Roichman, and Y. Shokef**Journal of Statistical Mechanics - Theory and Experiment**, 113209 (2019)

Mechanical interaction between cells facilitates molecular transport

D. Gomez, S. Natan, Y. Shokef, and A. Lesman

**Advanced Biosystems** 3, 1900192 (2019)

Kinetically constrained model for gravity-driven granular flow and clogging

G. Bolshak, R. Chatterjee, R. Lieberman, and Y. Shokef

** Physical Review E** 100, 032137 (2019)

Motion of active tracer in a lattice gas with cross-shaped particles

R. Chatterjee, N. Segall, C. Merrigan, K. Ramola, B. Chakraborty, and Y. Shokef

**Journal of Chemical Physics** 150, 144508 (2019)

Elastic interactions between anisotropically contracting circular cells

R. Golkov and Y. Shokef

** Physical Review E** 99, 032418 (2019)

Attraction controls the entropy of fluctuations in isosceles triangular networks

F. Leoni and Y. Shokef

**Entropy** 20, 122 (2018)

Hydrodynamics in kinetically constrained lattice-gas models

E. Teomy and Y. Shokef**Physical Review E** 95, 022124 (2017)

Attraction controls the inversion of order by disorder in buckled colloidal monolayers

F. Leoni and Y. Shokef**Physical Review Letters** 118, 218002 (2017)

Shape regulation generates elastic interaction between active force dipoles

R. Golkov and Y. Shokef**New Journal of Physics** 19, 063011 (2017)

Combinatorial design of textured mechanical metamaterials

C. Coulais, E. Teomy, K. de Reus, Y. Shokef, and M. van Hecke**Nature** 535, 529 (2016)

Jamming vs. caging in three dimensional jamming percolation

N. Segall, E. Teomy, and Y. Shokef**Journal of Statistical Mechanics - Theory and Experiment** 054051 (2016)

Relation between structure of blocked clusters and relaxation dynamics in kinetically constrained models

E. Teomy and Y. Shokef**Physical Review E** 92, 032133 (2015)

Response of adherent cells to mechanical perturbations of the surrounding matrix

D. Ben-Yaakov, R. Golkov, Y. Shokef, and S.A. Safran**Soft Matter** 11, 1412 (2015)

Finite-density effects in the Fredrickson-Andersen and Kob-Andersen kinetically-constrained models

E. Teomy and Y. Shokef**The Journal of Chemical Physics** 141, 064110 (2014)

Jamming by shape in kinetically-constrained models

E. Teomy and Y. Shokef**Physical Review E** 89, 032204 (2014)

Jamming percolation in three dimensions

A. Ghosh, E. Teomy, and Y. Shokef**Europhysics Letters** 106, 16003 (2014)

Buckled colloidal monolayers connect geometric frustration in soft and hard matter

Y. Shokef, Y. Han, A. Souslov, A.G. Yodh, and T.C. Lubensky**Soft Matter** 9, 6565 (2013)

Jamming transition of kinetically-constrained models in rectangular systems

E. Teomy and Y. Shokef**Physical Review E** 86, 051133 (2012)

Erratum: Scaling laws for the response of nonlinear elastic media with implications for cell mechanics

Y. Shokef and S.A. Safran**Physical Review Letters** 109, 169901 (2012)

Scaling laws for the response of nonlinear elastic media with implications for cell mechanics

Y. Shokef and S.A. Safran**Physical Review Letters** 108, 178103 (2012)

Dichotomic fluxoid quantization effects in a superconducting double network

I. Sochnikov, Y. Shokef, A. Shaulov, and Y. Yeshurun**Journal of Physics: Conference Series** 400, 022110 (2012)

Fluxoid quantization effects in high-Tc superconducting double networks

I. Sochnikov, Y. Shokef, G. Logvenov, I. Božovic, A. Shaulov, and Y. Yeshurun**Journal of Physics: Conference Series** 400, 022109 (2012)

Order-by-disorder in the antiferromagnetic Ising model on an elastic triangular lattice

Y. Shokef, A. Souslov, and T.C. Lubensky**Proceedings of the National Academy of Sciences of the USA** 108, 11804 (2011)

Single-loop like energy oscillations and staircase vortex occupation in superconducting double networks

I. Sochnikov, Y. Shokef, A. Shaulov, and Y. Yeshurun**Physical Review B** 84, 024513 (2011)

Effective temperature of red blood cell membrane fluctuations

E. Ben-Isaac, Y.K. Park, G. Popescu, F.L.H. Brown, N.S. Gov, and Y. Shokef**Physical Review Letters** 106, 238103 (2011)

Jamming mechanisms and density dependence in a kinetically-constrained model

Y. Shokef and A.J. Liu**Europhysics Letters** 90, 26005 (2010)

Randomness-induced redistribution of vibrational frequencies in amorphous solids

V. Ilyin, I. Procaccia, I. Regev, and Y. Shokef**Physical Review B** 80, 174201 (2009)

Stripes, zigzags, and slow dynamics in buckled hard spheres

Y. Shokef and T.C. Lubensky**Physical Review Letters** 102, 048303 (2009)

Geometric frustration in buckled colloidal monolayers

Y. Han, Y. Shokef, A.M. Alsayed, P. Yunker, T.C. Lubensky, and A.G. Yodh**Nature** 456, 898 (2008)

Frequency-dependent fluctuation-dissipation relations in granular gases

G. Bunin, Y. Shokef, and D. Levine**Physical Review E** 77, 051301 (2008)

Non-equilibrium statistical mechanics of dividing cell populations

N. Brenner and Y. Shokef**Physical Review Letters** 99, 138102 (2007)

Isolated non-equilibrium systems in contact

Y. Shokef, G. Shulkind, and D. Levine**Physical Review E** 76, 030101(R) (2007)

Energy distribution and effective temperatures in a driven dissipative model

Y. Shokef and D. Levine**Physical Review E** 74, 051111 (2006)

Fluctuation-dissipation relations in driven dissipative systems

Y. Shokef, G. Bunin, and D. Levine**Physical Review E** 73, 046132 (2006)

Studying hydrodynamic instabilities using shock-tube experiments

O. Sadot, K. Levy, A. Yosef-Hai, D. Cartoon, Y. Elbaz, Y. Srebro, G. Ben-Dor, and D. Shvarts**Astrophysics and Space Science** 298, 305 (2005)

Multidimensional analysis of direct-drive, plastic-shell implosions on OMEGA

P. B. Radha, T. J. B. Collins, J. A. Delettrez, Y. Elbaz, R. Epstein, V. Yu. Glebov, V. N. Goncharov, R. L. Keck, J. P. Knauer, J. A. Marozas, F. J. Marshall, R. L. McCrory, P. W. McKenty, D. D. Meyerhofer, S. P. Regan, T. C. Sangster, W. Seka, D. Shvarts, S. Skupsky, Y. Srebro, and C. Stoeckl**Physics of Plasmas** 12, 056307 (2005)

Two-dimensional simulations of plastic-shell, direct-drive implosions on OMEGA

P. B. Radha, V. N. Goncharov, T. J. B. Collins, J. A. Delettrez, Y. Elbaz, V. Yu. Glebov, R. L. Keck, D. E. Keller, J. P. Knauer, J. A. Marozas, F. J. Marshall, P. W. McKenty, D. D. Meyerhofer, S. P. Regan, T. C. Sangster, D. Shvarts, S. Skupsky, Y. Srebro, R. P. J. Town, and C. Stoeckl**Physics of Plasmas** 12, 032702 (2005)

Comment on "Temperature in nonequilibrium systems with conserved energy"

Y. Shokef and D. Levine**Physical Review Letters** 94, 208901 (2005)

Exactly solvable model for driven dissipative systems

Y. Shokef and D. Levine**Physical Review Letters** 93, 240601 (2004)

Role of friction in compaction and segregation of granular materials

Y. Shokef and D. Levine**Physical Review E** 68, 061301 (2003)

Modeling turbulent mixing in inertial confinement fusion implosions

Y. Srebro, D. Kushnir, Y. Elbaz, and D. Shvarts**Laser and Particle Beams** 21, 355-361 (2003)

A general buoyancy-drag model for the evolution of the Rayleigh-Taylor and Richtmyer-Meshkov instabilities

Y. Srebro, Y. Elbaz, O. Sadot, L. Arazi, and D. Shvarts**Laser and Particle Beams** 21, 347-353 (2003)

Scaling in the shock-bubble interaction

K. Levy, O. Sadot, A. Rikanati, D. Kartoon, Y. Srebro, A. Yosef-Hai, G. Ben-Dor, and D. Shvarts**Laser and Particle Beams** 21, 335-339 (2003)

Optical and plasma smoothing of laser imprinting in targets driven by lasers with SSD bandwidths up to 1 THz

T. R. Boehly, V. N. Goncharov, O. Gotchev, J. P. Knauer, D. D. Meyerhofer, D. Oron, S. P. Regan, Y. Srebro, W. Seka, D. Shvarts, S. Skupsky, and V. A. Smalyuk**Physics of Plasmas** 8, 2331-2337 (2001)

Scaling laws of nonlinear Rayleigh-Taylor and Richtmyer-Meshkov instabilities in two and three dimensions

D. Shvarts, D. Oron, D. Kartoon, A. Rikanati, O. Sadot, Y. Srebro, Y. Yedvab, D. Ofer, A. Levin, E. Sarid, G. Ben-Dor, L. Erez, G. Erez, A. Yosef-Hai, U. Alon, and L. Arazi**Comptes Rendus de l'Academie des Sciences - Series IV - Physics** 1, 719-726 (2000)

Studies in the nonlinear evolution of the Rayleigh-Taylor and Richtmyer-Meshkov instabilities and their role in inertial confinement fusion

D. Oron, O. Sadot, Y. Srebro, A. Rikanati, Y. Yedvab, U. Alon, L. Erez, G. Erez, G. Ben-Dor, L. A. Levin, D. Ofer, and D. Shvarts**Laser and Particle Beams** 17, 465-475 (1999)

Nonlinear evolution of broad-bandwidth, laser-imprinted nonuniformities in planar targets accelerated by 351-nm laser light

V. A. Smalyuk, T. R. Boehly, D. K. Bradley, V. N. Gonocharov, J. A. Delettrez, J. P. Knauer, D. D. Meyerhofer, D. Oron, D. Shvarts , Y. Srebro, and R. P. J. Town**Physics of Plasmas** 6, 4022-4036 (1999)